\documentclass[a4paper]{article}
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\usepackage{sectsty}
\usepackage[titles]{tocloft}
\usepackage{doxygen}
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\begin{document}
\hypersetup{pageanchor=false}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large TUNA \\[1ex]\large 1.0 }\\
\vspace*{1cm}
{\large Generated by Doxygen 1.7.4}\\
\vspace*{0.5cm}
{\small Sat Mar 3 2012 14:26:40}\\
\end{center}
\end{titlepage}
\pagenumbering{roman}
\tableofcontents
\pagenumbering{arabic}
\hypersetup{pageanchor=true}
\section{Class Index}
\input{hierarchy}
\section{Class Index}
\input{annotated}
\section{File Index}
\input{files}
\section{Class Documentation}
\input{classTuna_1_1GeneralEquation}
\input{classTuna_1_1GeneralMesh}
\input{classTuna_1_1Momentum__XCoDi}
\input{classTuna_1_1Momentum__YCoDi}
\input{classTuna_1_1Momentum__ZCoDi}
\input{classTuna_1_1NonUniform}
\input{classTuna_1_1PressureCorrection}
\input{classTuna_1_1ScalarEquation}
\input{classTuna_1_1StructuredMesh}
\input{structTuna_1_1timer}
\input{structTuna_1_1TunaArray}
\input{classTuna_1_1TwoPhaseEquation}
\input{structTuna_1_1Typeinfo_3_01NonUniform_3_01T_00_011_01_4_01_4}
\input{structTuna_1_1Typeinfo_3_01NonUniform_3_01T_00_012_01_4_01_4}
\input{structTuna_1_1Typeinfo_3_01NonUniform_3_01T_00_013_01_4_01_4}
\input{structTuna_1_1Typeinfo_3_01StructuredMesh_3_01T_01_4_01_4}
\input{structTuna_1_1Typeinfo_3_01Uniform_3_01T_00_011_01_4_01_4}
\input{structTuna_1_1Typeinfo_3_01Uniform_3_01T_00_012_01_4_01_4}
\input{structTuna_1_1Typeinfo_3_01Uniform_3_01T_00_013_01_4_01_4}
\input{classTuna_1_1Uniform}
\section{File Documentation}
\input{uniform__meshes_8cpp}
\input{complexmesh_8cpp}
\input{nonuniform__meshes_8cpp}
\input{hoffman_8cpp}
\input{laplace1D_8cpp}
\input{laplace2D_8cpp}
\input{heat1_8cpp}
\input{heat2_8cpp}
\input{heat3_8cpp}
\input{oops_8cpp}
\input{convection1_8cpp}
\input{convection2_8cpp}
\input{convection3_8cpp}
\input{convdiff1_8cpp}
\input{convdiff2_8cpp}
\input{convdiff3_8cpp}
\input{convdiff4_8cpp}
\input{convdiff5_8cpp}
\input{convdiff6_8cpp}
\input{convdiffLES_8cpp}
\input{BuckleyLeverett1D_8cpp}
\input{BuckleyLeverett2D_8cpp}
\input{singlePhase1D_8cpp}
\input{singlePhase2D_8cpp}
\input{singlePhase3D_8cpp}
\input{WaterFlooding1D_8cpp}
\input{Tuna_8hpp}
\printindex
\end{document}
